Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf_rnaediting2strands.cwl

https://github.com/YeoLab/sailor.git

Path: CWL-SINGULARITY-pipeline-building-code/cwl/wf_rnaediting2strands.cwl

Branch/Commit ID: ac365afe919cf9da6ebfd0b748eca9e747e9cb50
workflow graph pipeline-pe.cwl

ATAC-seq pipeline - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/pipeline-pe.cwl

Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
workflow graph foreign_screening.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/foreign_screening.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph exome alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_exome.cwl

Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
workflow graph 01-map-se.cwl

DNase-seq 01 mapping - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/DNase-seq_pipeline/01-map-se.cwl

Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
workflow graph 03-map-se.cwl

ChIP-seq 03 mapping - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/03-map-se.cwl

Branch/Commit ID: 21b15e76119981cb564bc3927456ffc6c473015f
workflow graph ACTseq_spike_in.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflows/ACTseq_spike_in.cwl

Branch/Commit ID: e2f3e99deba204a31af06646a8326b41242b07a8
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: c23dc7f113ca0b0a3127a5d6c696e98d4799460c
workflow graph qiime2 explore sample taxonomic composition

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-dada2-paired.cwl

Branch/Commit ID: e2dc95d4f12210359360d814382e7201d836dfcf

Packed ID: qiime2-08-taxonomic-analysis.cwl
workflow graph vecscreen.cwl

https://github.com/ncbi/pgap.git

Path: vecscreen/vecscreen.cwl

Branch/Commit ID: f5a467a21b8f69aef5666fb7bbf35efd98c0cbea