Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
wf_full_IDR_pipeline_1input.cwl
The main workflow that: produces two reproducible peaks via IDR given two eCLIP samples (1 input total for both reps, 1 IP each replicate). runs the 'rescue ratio' statistic runs the 'consistency ratio' statistic |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_full_IDR_pipeline_1input.cwl Branch/Commit ID: master |
|
|
|
exomeseq-gatk4-preprocessing/v2.0.3
Whole Exome Sequence preprocessing using GATK4 - v2.0.3 |
https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: v2.0.3 |
|
|
|
steplevel-resreq.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/steplevel-resreq.cwl Branch/Commit ID: main |
|
|
|
canine_gatk_cnv_module.cwl
|
https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_gatk_cnv_module.cwl Branch/Commit ID: master |
|
|
|
hello_world.cwl
|
https://github.com/dockstore/hello_world.git
Path: hello_world.cwl Branch/Commit ID: master |
|
|
|
Sort and merge input bed file and generate a .sorted.merged.bed file
|
https://github.com/swamyuma/cwl-tools.git
Path: sort_merge.cwl Branch/Commit ID: main |
|
|
|
dfastqc-filelist-outputdir.cwl
|
https://github.com/nigyta/bact_genome.git
Path: cwl/workflow/dfastqc-filelist-outputdir.cwl Branch/Commit ID: master |
|
|
|
Runs InterProScan on batches of sequences to retrieve functional annotations.
|
https://github.com/stain/workflow-is-cwl.git
Path: workflows/InterProScan-v5-chunked-wf.cwl Branch/Commit ID: avoid-spaces |
|
|
|
input_fastq_processing_workflow.cwl
|
https://github.com/NCI-GDC/gdc-rnaseq-cwl.git
Path: rnaseq-star-align/subworkflows/preprocessing/input_fastq_processing_workflow.cwl Branch/Commit ID: master |
|
|
|
upload_results_workflow.cwl
|
https://github.com/NCI-GDC/htseq-cwl.git
Path: workflows/subworkflows/upload_results_workflow.cwl Branch/Commit ID: master |
