Explore Workflows
View already parsed workflows here or click here to add your own
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bam_filtering
BAM filtering |
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
Path: workflows/rna-selector.cwl Branch/Commit ID: f993cad |
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exome alignment and germline variant detection
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Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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Path: tools/tRNA_selection.cwl Branch/Commit ID: caea457 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: test |
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rRNA annotation workflow with scatter processing
\"This workflow performs rRNA annotation processing for multiple index files using scatter. It executes 4 processes: makeblastdb, blastn alignment, filtering, and rRNA removal for each rRNA index file. related CWL file: ./Tools/09_makeblastdb_rRNA.cwl ./Tools/10_blastn_rRNA_alignment.cwl ./Tools/10_blastn_rRNA_filter1.cwl ./Tools/10_blastn_rRNA_filter2.cwl ./Tools/10_blastn_rRNA_filter3.cwl\" |
Path: Workflow/blastn_rRNA_ssw.cwl Branch/Commit ID: main |
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collate_unique_rRNA_headers.cwl
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Path: tools/collate_unique_rRNA_headers.cwl Branch/Commit ID: 0fed1c9 |
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Tumor-Only Detect Variants workflow
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Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: master |
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annotate.cwl
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Path: steps/annotate.cwl Branch/Commit ID: main |
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steps.cwl
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Path: steps.cwl Branch/Commit ID: b8e641c |
