Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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preprocessAndCluster.cwl
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https://github.com/Epigenomics-Screw/Screw.git
Path: cwl/preprocessAndCluster.cwl Branch/Commit ID: scatter |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: master |
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WGS QC workflow nonhuman
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: master |
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clustering.cwl
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https://github.com/Epigenomics-Screw/Screw.git
Path: cwl/clustering.cwl Branch/Commit ID: scatter |
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access_qc.cwl
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https://github.com/msk-access/qc_generation.git
Path: access_qc.cwl Branch/Commit ID: develop |
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bulk_analysis.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_analysis.cwl Branch/Commit ID: 06aeffe |
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Quality assessment, amplicon classification
Workflow for quality assessment of paired reads and classification using NGTax 2.0. In addition files are exported to their respective subfolders for easier data management in a later stage. Steps: - FastQC (read quality control) - NGTax 2.0 - Export module |
https://git.wageningenur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_ngtax.cwl Branch/Commit ID: master |
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main-pisces-ras.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: somatic-lowfreq/pisces-ras-workflow/main-pisces-ras.cwl Branch/Commit ID: master |
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two-step-workflow.cwl
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https://github.com/BiodataAnalysisGroup/intro-to-cwl-docker.git
Path: _includes/cwl/two-step-workflow.cwl Branch/Commit ID: gh-pages |
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prok-annotation-cheetah.cwl
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https://github.com/mr-c/gales.git
Path: cwl/workflows/prok-annotation-cheetah.cwl Branch/Commit ID: upgrade-test |
