Explore Workflows

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: No_filters_detect_variants

https://github.com/azzaea/cwl-scalability-vis.git

Path: host_process.cwl

Branch/Commit ID: main

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 8515542

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: toil_compatibility

This workflow merge BAM files per condition in parallel

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/merge-bam-parallel.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 8515542

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: 8515542

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/paired_end/kallisto_wf_pe.cwl

Branch/Commit ID: master

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: preprocess_vcf.cwl

Branch/Commit ID: develop

https://github.com/sevenbridges-openworkflows/Broad-Best-Practice-Data-pre-processing-CWL1.0-workflow-GATK-4.1.0.0.git

Path: broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl

Branch/Commit ID: master