Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph pair-workflow.cwl

https://github.com/mskcc/argos-cwl.git

Path: workflows/pair-workflow.cwl

Branch/Commit ID: master
workflow graph ST520107.cwl

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520107.cwl

Branch/Commit ID: main
workflow graph presto.cwl

https://github.com/EOSC-LOFAR/presto-cwl.git

Path: presto.cwl

Branch/Commit ID: master
workflow graph metaphlan_wfl.cwl

https://github.com/stevetsa/metaphlan-sbcgc.git

Path: metaphlan_wfl.cwl

Branch/Commit ID: master
workflow graph upload_results.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/utils/upload_results.cwl

Branch/Commit ID: master
workflow graph three_step_color.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/three_step_color.cwl

Branch/Commit ID: main
workflow graph annotator_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/OxoG-Dockstore-Tools.git

Path: annotator_sub_wf.cwl

Branch/Commit ID: develop
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_orf_hmms.cwl

Branch/Commit ID: test
workflow graph exome alignment and germline variant detection

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: master
workflow graph pcawg_oxog_wf.cwl

This workflow will perform OxoG filtering on a set of VCFs. It will produce VCFs and their associated index files.

https://github.com/ICGC-TCGA-PanCancer/pcawg-oxog-filter.git

Path: pcawg_oxog_wf.cwl

Branch/Commit ID: 1.0.0