Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 71d9c83
workflow graph bam_filtering

BAM filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/bam_filtering.cwl

Branch/Commit ID: 3bb03c9b
workflow graph Varscan Workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: master
workflow graph qiime2 demux paired sequences

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step1-import-demux-paired.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-02-demux-emp-paired.cwl
workflow graph search.cwl#main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/search.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: caea457
workflow graph Optical throughput measurements via muon ring analysis

Upon receiving a new DL0 data product (from either Monte Carlo simulations or observations), DPPS triggers the CalibPipe (ctapipe-process) to process the data using ctapipe, extracting the signal charges and reconstructing muon parameters. The second step involves using the CalibPipe tool to estimate the telescope’s optical throughput using a predefined number of muon events.

https://github.com/burmist-git/076_cwl.git

Path: uc-120-2.2-optical-throughput-calibration-with-muons.cwl

Branch/Commit ID: master
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/topmed-workflows.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: 1.19.0
workflow graph wf.cwl

https://github.com/MarkRobbo/subworkflow-test.git

Path: NF_Hello/wf.cwl

Branch/Commit ID: master
workflow graph wf.cwl#UncompressDatatables.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: UncompressDatatables.cwl