Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revcomp.cwl

https://github.com/puentesdiaz/workflows.git

Path: workflows/sanbi_cwltutorial/revcomp/revcomp.cwl

Branch/Commit ID: master
workflow graph bam-genomecov-bigwig.cwl

creates genome coverage bigWig file from .bam file

 https://github.com/Barski-lab/ga4gh_challenge.git

Path: workflows/bam-genomecov-bigwig.cwl

Branch/Commit ID: v0.0.2
workflow graph gk-run-qeheat-snapshot.cwl

https://github.com/vdikan/cwl-gk-thermal.git

Path: cwl/gk-run-qeheat-snapshot.cwl

Branch/Commit ID: master
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: steps/salmon-quantification.cwl

Branch/Commit ID: release
workflow graph Single-cell RNA-Seq Alignment

Single-cell RNA-Seq Alignment Runs Cell Ranger Count to quantify gene expression from a single-cell RNA-Seq library.

 https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-rna-align-wf.cwl

Branch/Commit ID: main
workflow graph viralrecon.nanopore.single.cwl

https://github.com/inutano/viralrecon-cwl.git

Path: nanopore/workflow/viralrecon.nanopore.single.cwl

Branch/Commit ID: development
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 0cd2d70
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 135976d
workflow graph icgc_pcawg_dkfz_embl_workflow.cwl

https://github.com/sbg/sbg_dockstore_tools.git

Path: pcawg/vc/icgc_pcawg_dkfz_embl_workflow.cwl

Branch/Commit ID: v1.0.0
workflow graph SV Pipeline

https://github.com/ChrisMaherLab/PACT.git

Path: pipelines/sv_pipeline.cwl

Branch/Commit ID: master