Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: f6b5196
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/ome-tiff-pyramid.git

Path: pipeline.cwl

Branch/Commit ID: b1b40c4
workflow graph split_bam_workflow.cwl

https://github.com/nci-gdc/htseq-cwl.git

Path: workflows/subworkflows/split_bam_workflow.cwl

Branch/Commit ID: master
workflow graph mutect parallel workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: mutect/workflow.cwl

Branch/Commit ID: master
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/ICGC-TCGA-PanCancer/pcawg-minibam.git

Path: preprocess_vcf.cwl

Branch/Commit ID: develop
workflow graph image_series.cwl

https://github.com/peijin94/LOFAR-Sun-tools.git

Path: utils/IM/LINC/lincSun/workflow/image_series.cwl

Branch/Commit ID: master
workflow graph harmonization_novoalign.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_novoalign.cwl

Branch/Commit ID: master
workflow graph Detect Docm variants

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: master
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: ca6ca613