Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 03-map-pe-umis.cwl

STARR-seq 03 mapping - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe-umis.cwl

Branch/Commit ID: master
workflow graph chipseq_tf_align.cwl

https://github.com/bxlab/vision-workflows.git

Path: chipseq_tf_align.cwl

Branch/Commit ID: master
workflow graph mutect2_calling.cwl

GATK4.1.2 Mutect2 workflow

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: subworkflows/mutect2_calling.cwl

Branch/Commit ID: master
workflow graph qiime2 explore sample taxonomic composition

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-deblur.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: qiime2-08-taxonomic-analysis.cwl
workflow graph bam_filtering

BAM filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl

Branch/Commit ID: 1.0.5
workflow graph Unaligned to aligned BAM

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph rhapsody_pipeline_2.0.cwl#VDJ_Preprocess_Reads.cwl

https://github.com/Chi-CRL/cwl_check_workflow.git

Path: rhapsody_pipeline_2.0.cwl

Branch/Commit ID: main

Packed ID: VDJ_Preprocess_Reads.cwl
workflow graph count-lines16-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines16-wf.cwl

Branch/Commit ID: master
workflow graph download-GRCh38.cwl

https://github.com/hacchy1983/CWL-workflows.git

Path: Workflows/download-GRCh38.cwl

Branch/Commit ID: master
workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines14-wf.cwl

Branch/Commit ID: main