Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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02-trim-pe.cwl
ChIP-seq 02 trimming - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 930a2cf |
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Runs InterProScan on batches of sequences to retrieve functional annotations.
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https://github.com/hmenager/workflow-is-cwl.git
Path: workflows/InterProScan-v5-chunked-wf.cwl Branch/Commit ID: master |
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bwameth_mulitlib_start_with_trimmed.cwl
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https://github.com/ifishlin/Benchmarking_CWL.git
Path: workflows/bwameth/bwameth_mulitlib_start_with_trimmed.cwl Branch/Commit ID: main |
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umccrise-pipeline__2.3.0--0.cwl
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https://github.com/umccr/cwl-ica.git
Path: workflows/umccrise-pipeline/2.3.0--0/umccrise-pipeline__2.3.0--0.cwl Branch/Commit ID: main |
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marianas_collapsing_workflow.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/marianas/marianas_collapsing_workflow.cwl Branch/Commit ID: master |
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qiime2 create feature visual summaries
FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-deblur.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-04-features.cwl |
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host.sort.workflow.cwl
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https://github.com/azzaea/cwl-scalability-vis.git
Path: host.sort.workflow.cwl Branch/Commit ID: main |
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preference-workflow.cwl
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https://github.com/johnbradley/iMADS-worker.git
Path: predict_service/preference-workflow.cwl Branch/Commit ID: master |
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
https://github.com/Barski-lab/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: cf678db8304ffaa20c1d6c854364db5ed41803c2 |
