Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	ocrevaluation-performance-test-files-wf-pack.cwl#ocrevaluation-performance-wf.cwl	https://github.com/kbnlresearch/ochre.git Path: ochre/cwl/ocrevaluation-performance-test-files-wf-pack.cwl Branch/Commit ID: master Packed ID: ocrevaluation-performance-wf.cwl
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/litd/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: master
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: master
	count-lines11-null-step-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines11-null-step-wf.cwl Branch/Commit ID: main
	exome alignment and germline variant detection, with optitype for HLA typing	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: downsample_and_recall
	Detect Variants workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: downsample_and_recall
	wf-alignment.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: somatic-lowfreq/pisces-ras-workflow/wf-alignment.cwl Branch/Commit ID: master
	step-valuefrom5-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/step-valuefrom5-wf.cwl Branch/Commit ID: master
	count-lines7-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines7-wf.cwl Branch/Commit ID: main
	Chipseq alignment with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq.cwl Branch/Commit ID: master

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