Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph readme-assembly-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_create_readme/readme-assembly-workflow.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 5833078
workflow graph count-lines1-wf-noET.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines1-wf-noET.cwl

Branch/Commit ID: master
workflow graph chip-seq-alignment.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/chip-seq-alignment.cwl

Branch/Commit ID: master
workflow graph kallisto-pe.cwl

https://github.com/yyoshiaki/cwl_user_guide.git

Path: kallisto/kallisto-pe.cwl

Branch/Commit ID: master
workflow graph Workflow that executes the Sounder SIPS end-to-end L1a processing

Cognito credentials to access the U-DS services are retrieved from the AWS Parameter Store with the supplied keys.

 https://github.com/unity-sds/unity-sps-workflows.git

Path: sounder_sips/ssips_L1a_workflow.cwl

Branch/Commit ID: main
workflow graph io-int-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/io-int-wf.cwl

Branch/Commit ID: master
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/icgc-tcga-pancancer/pcawg-minibam.git

Path: preprocess_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph bulk scRNA-seq pipeline using Salmon

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: bulk-pipeline.cwl

Branch/Commit ID: b9c8e26
workflow graph 01-qc-se.cwl

ChIP-seq 01 QC - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: master