Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Sort and merge input bed file and generate a .sorted.merged.bed file

https://github.com/swamyuma/cwl-tools.git

Path: sort_merge.cwl

Branch/Commit ID: main
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 8515542
workflow graph preprocess.cwl

https://github.com/Epigenomics-Screw/Screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: dev
workflow graph conditional_step_no_inputs.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/conditional_step_no_inputs.cwl

Branch/Commit ID: main
workflow graph exome alignment and somatic variant detection

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/somatic_exome_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph preprocessing for metagenomic short reads

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: src/workflows/metagenome_qc.cwl

Branch/Commit ID: master
workflow graph Run pindel on provided region

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 2104dc3
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: 06aeffe