Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-01-preprocessing.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-01-preprocessing.cwl

Branch/Commit ID: cb2c1423d635b2d8527103835b4918ffdf1f5b80
workflow graph varscan somatic workflow

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/varscan.cwl

Branch/Commit ID: master
workflow graph WGS and MT analysis for fastq files

rna / protein - qc, preprocess, filter, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/wgs-fastq.workflow.cwl

Branch/Commit ID: master
workflow graph STAR-Alignment-PE-circRNA

This workflow aligns the fastq files using STAR for paired-end samples to be used in circRNA pipeline

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Alignments/star-alignment-circRNA-default.cwl

Branch/Commit ID: master
workflow graph wf-variantcall.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl

Branch/Commit ID: master
workflow graph rnaseq-pe-dutp.cwl

RNA-Seq basic analysis workflow for strand specific paired-end experiment.

https://github.com/datirium/workflows.git

Path: workflows/rnaseq-pe-dutp.cwl

Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847
workflow graph SetEffectiveFocalLength

Calculate effective focal length for the given telescope optics.

 https://github.com/gammasim/workflows.git

Path: workflows/SetEffectiveFocalLength.cwl

Branch/Commit ID: main
workflow graph cnv_codex

CNV CODEX calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_codex.cwl

Branch/Commit ID: 1.0.7
workflow graph extract_single_optional_file.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/extract_single_optional_file.cwl

Branch/Commit ID: main
workflow graph scatter_tail.cwl

https://github.com/giannisdoukas/CWLJNIKernel.git

Path: tests/cwl/scatter_tail.cwl

Branch/Commit ID: master