Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: f993cad
workflow graph nanopore_bcr_abl_umi_analysis.cwl

https://github.com/teoloup/nanopore_fusion.git

Path: nanopore_bcr_abl_umi_analysis.cwl

Branch/Commit ID: main
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5dc7c5c
workflow graph exomeseq.cwl#exomeseq-01-preprocessing.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/exomeseq.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: exomeseq-01-preprocessing.cwl
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines4-wf.cwl

Branch/Commit ID: master
workflow graph simple_magicblast.cwl

https://github.com/NCBI-Hackathons/BLAST-Pipelines-and-FAIR.git

Path: blast-pipelines/simple_magicblast.cwl

Branch/Commit ID: master
workflow graph Bisulfite QC tools

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: low-vaf
workflow graph preference-workflow.cwl

https://github.com/johnbradley/imads-worker.git

Path: predict_service/preference-workflow.cwl

Branch/Commit ID: master
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: preprocess_vcf.cwl

Branch/Commit ID: develop
workflow graph createindex_singlevirus.cwl

https://github.com/yyoshiaki/VIRTUS.git

Path: workflow/createindex_singlevirus.cwl

Branch/Commit ID: master