Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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sc_atac_seq_process_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/sc_atac_seq_process_and_analyze.cwl Branch/Commit ID: d0e845d |
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pipeline-se-blacklist-removal.cwl
ATAC-seq pipeline - reads: SE - with blacklist removal |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-se-blacklist-removal.cwl Branch/Commit ID: master |
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repliseq-parta.cwl
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https://github.com/4dn-dcic/pipelines-cwl.git
Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl Branch/Commit ID: dev2 |
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workflow.cwl
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https://github.com/ljdursi/cwl-tutorial.git
Path: bioinformatics/tools/workflow.cwl Branch/Commit ID: master |
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fp_filter workflow
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: No_filters_detect_variants |
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tRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 43d2fb8 |
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03-map-pe-blacklist-removal.cwl
ATAC-seq 03 mapping - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/03-map-pe-blacklist-removal.cwl Branch/Commit ID: v1.0.0 |
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Water bodies detection based on NDWI and the otsu threshold
Water bodies detection based on NDWI and otsu threshold applied to a single Sentinel-2 COG STAC item |
https://github.com/eoap/quickwin.git
Path: cwl-workflow/app-water-body-cloud-native.cwl Branch/Commit ID: main Packed ID: main |
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bgzip and index VCF
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: No_filters_detect_variants |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: test |
