Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph format_rrnas_from_seq_entry

https://github.com/ncbi/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: 69c0f25d08cfa02d8bfaa85ce5d70dd14cc52e3f
workflow graph Water bodies detection based on NDWI and otsu threshold

Water bodies detection based on NDWI and otsu threshold

 https://github.com/Terradue/ogc-eo-application-package-hands-on.git

Path: water-bodies/app-package.cwl

Branch/Commit ID: 3e2f4f0fbdf6bc272f3e01eca0530158685a34cf

Packed ID: water_bodies
workflow graph gather AML trio outputs

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/aml_trio_cle_gathered.cwl

Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines3-wf.cwl

Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
workflow graph Vcf concordance evaluation workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_eval_concordance.cwl

Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a
workflow graph gdc_rnaseq_main_workflow.cwl

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/subworkflows/gdc_rnaseq_main_workflow.cwl

Branch/Commit ID: 1da226915d882b79996bae7ca05eae0b3dcbf272
workflow graph umi per-lane alignment subworkflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/umi_alignment.cwl

Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a
workflow graph bacteria-genome.cwl

DAT2-cwl bacteria genome data analysis workflow. see https://github.com/pitagora-network/DAT2-cwl/blob/main/workflow/bacteria-genome/README.md

 https://github.com/pitagora-network/DAT2-cwl.git

Path: workflow/bacteria-genome/bacteria-genome.cwl

Branch/Commit ID: 6db4456ca7314b036e59f50910654066da99772a
workflow graph gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: gatk4-mutect2-tumor-only-cwl/gpas_gatk4.2.4.1_mutect2_tumor_only_workflow.cwl

Branch/Commit ID: 58b62b1bf329b3fbffbd5d9080709999bebc1763
workflow graph module-4.cwl

https://github.com/mskcc/access-pipeline.git

Path: workflows/module-4.cwl

Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf