Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Bisulfite QC tools

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph kfdrc_alignment_pipeline.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/pilot-run/worklflows/kfdrc_alignment_pipeline.cwl

Branch/Commit ID: d4e818c8b9bf56c83694639aa542bb5c1a174f7d
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad
workflow graph wf-loadContents3.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/wf-loadContents3.cwl

Branch/Commit ID: c7c97715b400ff2194aa29fc211d3401cea3a9bf
workflow graph Bisulfite QC tools

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: 5fda2d9eb52a363bd51011b3851c2afb86318c0c
workflow graph wps_workflow.cwl

This WPS workflow is designed to process ERA5 data, which is usually gathered as two sets of meteorological input grib files, atmosphere (3D data) and surface (2D data). This workflow does not include the geogrid step, that will need to be run separately. Required Inputs: * geo_em* input files (generated by geogrid) * 2 VTables, atmosphere and surface * 2 sets of Grib files, atmosphere and surface * 2 ungrib namelist files, atmosphere and surface * 1 metgrid namelist file Returns: * met_em* files for a single WRF simulation

https://github.com/UoMResearchIT/wrf_emep_cwl_linear_workflow.git

Path: workflows/wps_workflow.cwl

Branch/Commit ID: 70c6a6016eeb4434a3ad82af7908b83d4ea37ce7
workflow graph AcceptParameterWorkflowMissing

this is a placeholder for a missing acceptance workflow.

 https://github.com/gammasim/workflows.git

Path: workflows/AcceptParameterWorkflowMissing.cwl

Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
workflow graph scatter-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/scatter-workflow.cwl

Branch/Commit ID: 588a8d368e90449f111d9b2581d4ba57039836d4
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 5fda2d9eb52a363bd51011b3851c2afb86318c0c