Explore Workflows

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520103.cwl

Branch/Commit ID: main

SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.

https://github.com/longbow0/cwl.git

Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl

Branch/Commit ID: master

Packed ID: SplitAndSubsample.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 71d9c83

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 8515542

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-i5only-wf.cwl

Branch/Commit ID: master

https://github.com/atanikan/workflow-cwl.git

Path: workflow.cwl

Branch/Commit ID: feature_commanlinecwl

Receive parameter update (e.g., by querying an external source like a configuration or calibration database) or by expert input (e.g., by a member of a telescope team or a simulation pipeline expert).

https://github.com/gammasim/workflows.git

Path: workflows/SetParameterFromExternal.cwl

Branch/Commit ID: main

https://github.com/yeolab/eclip.git

Path: cwl/wf_trim_partial_and_map_se_scatter.cwl

Branch/Commit ID: master

https://github.com/YeoLab/sailor.git

Path: cwl/wf_rnaediting2strands.cwl

Branch/Commit ID: master