Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph adapter for sequence_align_and_tag

Some workflow engines won't stage files in our nested structure, so parse it out here

 https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl

Branch/Commit ID: master
workflow graph wf-alignment.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-alignment.cwl

Branch/Commit ID: master
workflow graph KARIN_HR.cwl

https://github.com/CS-SI/chronos-demo.git

Path: cwl/KARIN_HR.cwl

Branch/Commit ID: f4dff46
workflow graph trim_and_map.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflow_modules/trim_and_map.cwl

Branch/Commit ID: master
workflow graph bam-bedgraph-bigwig.cwl

https://github.com/Barski-lab/ga4gh_challenge.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: master
workflow graph Apply filters to VCF file

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/germline_filter_vcf.cwl

Branch/Commit ID: downsample_and_recall
workflow graph kf-cram2gvcf_calc_contam.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/kf-cram2gvcf_calc_contam.cwl

Branch/Commit ID: dev
workflow graph rnaseq-star-rsem-pe.cwl

https://github.com/pitagora-network/dat2-cwl.git

Path: workflow/rna-seq/rnaseq-star-rsem-pe/rnaseq-star-rsem-pe.cwl

Branch/Commit ID: main
workflow graph contam_euk.cwl

https://github.com/NCBI-Hackathons/ContaminationScreen.git

Path: cwl/workflow/contam_euk.cwl

Branch/Commit ID: master
workflow graph SetParameterWorkflowMissing

This is a placeholder for a missing setting workflow.

 https://github.com/gammasim/workflows.git

Path: workflows/SetParameterWorkflowMissing.cwl

Branch/Commit ID: main