Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph abra_workflow.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/ABRA/abra_workflow.cwl

Branch/Commit ID: master
workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 3f85843
workflow graph wf-alignment.cwl

https://github.com/FarahZKhan/bcbio_test_cwlprov.git

Path: somatic/somatic-workflow/wf-alignment.cwl

Branch/Commit ID: master
workflow graph trnascan_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: test
workflow graph CODEX analysis pipeline using Cytokit

https://github.com/hubmapconsortium/codex-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: no-gpu-for-cwl-vis-only
workflow graph 03-map-se-blacklist-removal.cwl

ATAC-seq 03 mapping - reads: SE - blacklist removal

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se-blacklist-removal.cwl

Branch/Commit ID: master
workflow graph Get Proteins

https://github.com/ncbi/pgap.git

Path: wf_bacterial_prot_src.cwl

Branch/Commit ID: master
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: master
workflow graph HLA_LA_workflow_full.cwl

https://github.com/mdaya/hla_la_typing.git

Path: HLA_LA_workflow_full.cwl

Branch/Commit ID: master