Explore Workflows

run 3-pass dedup: algo LocusCollector + algo Dedup output_dup_read_name + algo Dedup dedup_by_read_name sequentially in distributed mode

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/dedup-3-pass-distr.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 8e196ab

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl

Branch/Commit ID: 203797516329f7fb8aa5e763e6f9b331c63c3060

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf4.cwl

Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37

Packed ID: main

https://github.com/4dn-dcic/docker-4dn-hic.git

Path: cwl/hi-c-processing-pairs.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl

Branch/Commit ID: 62ae25772a8e98b6591554882daa3f3758079fca

Packed ID: wf

Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/trim-rnaseq-pe-dutp.cwl

Branch/Commit ID: master

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: QualityFilterOuter.cwl

https://github.com/msk-access/qc_generation.git

Path: access_qc__packed.cwl

Branch/Commit ID: develop

Packed ID: qc_aggregator.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snaptools_create_snap_file.cwl

Branch/Commit ID: 302f1f3