Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wgetkegg_wf.cwl
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https://github.com/manabuishii/wgetkegg.git
Path: wgetkegg_wf.cwl Branch/Commit ID: master |
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exomeseq-gatk4-preprocessing/v2.0.3
Whole Exome Sequence preprocessing using GATK4 - v2.0.3 |
https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: v2.0.3 |
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wf-loadContents4.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/wf-loadContents4.cwl Branch/Commit ID: master |
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ST520103.cwl
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https://github.com/Marco-Salvi/cwl-ro-crate.git
Path: ST520103.cwl Branch/Commit ID: main |
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Runs InterProScan on batches of sequences to retrieve functional annotations.
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/InterProScan-v5-chunked-wf.cwl Branch/Commit ID: assembly |
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WES GATK4 Preprocessing
Whole Exome Sequence analysis GATK4 Preprocessing |
https://github.com/Duke-GCB/bespin-cwl.git
Path: workflows/exomeseq-gatk4-preprocessing.cwl Branch/Commit ID: master |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/david4096/oxog-dockstore-tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: develop |
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picard_markduplicates
Mark duplicates |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: 1.0.6 |
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exome alignment and germline variant detection
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https://github.com/genome/cancer-genomics-workflow.git
Path: detect_variants/germline_detect_variants.cwl Branch/Commit ID: toil_compatibility |
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exomeseq-gatk4-03-organizedirectories.cwl
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https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: v2.0.3 |
