Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines5-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines5-wf.cwl Branch/Commit ID: 4fd45edb9531a03223c18a586e32d0baf0d5acb2
	xenbase-sra-to-fastq-pe.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-pe.cwl Branch/Commit ID: 942f453603bc1df04cee28d6ac6b3b8b649fda55
	scatter-valuefrom-wf1.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/scatter-valuefrom-wf1.cwl Branch/Commit ID: e62f99dd79d6cb9c157cceb458f74200da84f6e9
	chipseq-se.cwl Runs ChIP-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/chipseq-se.cwl Branch/Commit ID: 64e85970dbecba89c3380ab285c108d221e76fe6
	env-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: 7c7615c44b80f8e76e659433f8c7875603ae0b25
	ldv_prefactor_target.cwl	https://git.astron.nl/RD/LINC.git Path: workflows/ldv_prefactor_target.cwl Branch/Commit ID: 8a697be0fa85795f7822146015edf963a5681ca7
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/scatter-wf3.cwl Branch/Commit ID: 664835e83eb5e57eee18a04ce7b05fb9d70d77b7 Packed ID: main
	THOR - differential peak calling of ChIP-seq signals with replicates What is THOR? -------------- THOR is an HMM-based approach to detect and analyze differential peaks in two sets of ChIP-seq data from distinct biological conditions with replicates. THOR performs genomic signal processing, peak calling and p-value calculation in an integrated framework. For more information please refer to: ------------------------------------- Allhoff, M., Sere K., Freitas, J., Zenke, M., Costa, I.G. (2016), Differential Peak Calling of ChIP-seq Signals with Replicates with THOR, Nucleic Acids Research, epub gkw680.	https://github.com/datirium/workflows.git Path: workflows/rgt-thor.cwl Branch/Commit ID: 675a3ff982091faf304931e9261aacdbabf51702
	cond-wf-009_nojs.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/conditionals/cond-wf-009_nojs.cwl Branch/Commit ID: e62f99dd79d6cb9c157cceb458f74200da84f6e9
	Cell Ranger ARC Count Gene Expression + ATAC Cell Ranger ARC Count Gene Expression + ATAC ============================================	https://github.com/datirium/workflows.git Path: workflows/cellranger-arc-count.cwl Branch/Commit ID: ebbf23764ede324cabc064bd50647c1f643726fa