Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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wf_extract_prism_data.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/extract_prism_data/wf_extract_prism_data.cwl Branch/Commit ID: master |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-alignment.cwl Branch/Commit ID: master |
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wf_get_reproducible_eclip_peaks.cwl
The main workflow that produces two reproducible peaks via IDR given two eCLIP samples (1 input, 1 IP each). |
https://github.com/YeoLab/merge_peaks.git
Path: cwl/wf_get_reproducible_eclip_peaks.cwl Branch/Commit ID: master |
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wf-variantcall.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-variantcall.cwl Branch/Commit ID: master |
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biowardrobe_chipseq_se.cwl
The workflow is used to run CHIP-Seq basic analysis with single-end input FASTQ file. In outputs it returns coordinate sorted BAM file alongside with index BAI file, quality statistics of the input FASTQ file, reads coverage in a form of bigWig file, peaks calling data in a form of narrowPeak or broadPeak files. |
https://github.com/Barski-lab/ga4gh_challenge.git
Path: biowardrobe_chipseq_se.cwl Branch/Commit ID: master |
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topmed-alignment.cwl
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https://github.com/stain/topmed-workflows.git
Path: aligner/sbg-alignment-cwl/topmed-alignment.cwl Branch/Commit ID: namespaces |
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snaptools_create_snap_file.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/snaptools_create_snap_file.cwl Branch/Commit ID: v1.0 |
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Gz_Fasta_GC_TRF_CpG.cwl
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https://github.com/EnsemblGSOC/tony-gsoc-2018.git
Path: workflow/Gz_Fasta_GC_TRF_CpG.cwl Branch/Commit ID: master |
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gk-store-result.cwl
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https://github.com/vdikan/cwl-gk-thermal.git
Path: cwl/gk-store-result.cwl Branch/Commit ID: master |
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test-data.cwl
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https://github.com/kyusque/abmp_log_dump2pieda.git
Path: test-data.cwl Branch/Commit ID: master |