Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ValidateReadout

Validate readout (if applicable for high and low gain chain).

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateReadout.cwl

Branch/Commit ID: main
workflow graph pass-unconnected.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/pass-unconnected.cwl

Branch/Commit ID: master
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_gathered.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_prep_process_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: sc_atac_seq_prep_process_analyze.cwl

Branch/Commit ID: 7fed36f
workflow graph wf_split_self_and_idr.cwl

This workflow returns the reproducible number of split peaks given a single bam file and its size-matched input pair. This workflow splits the bam file first, but does not do anything to the input.

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_split_self_and_idr.cwl

Branch/Commit ID: master
workflow graph Pipeline for converting dcc files output by GeoMX into sample by gene matrices

https://github.com/hubmapconsortium/geomx-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: 25f3f48
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: a33bc8a
workflow graph canine_sequenza_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_sequenza_module.cwl

Branch/Commit ID: master
workflow graph abra_workflow.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/ABRA/abra_workflow.cwl

Branch/Commit ID: master
workflow graph ST520105.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520105.cwl

Branch/Commit ID: main