Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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ST520114.cwl
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https://github.com/Marco-Salvi/cwl-ro-crate.git
Path: ST520114.cwl Branch/Commit ID: main |
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createindex.cwl
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https://github.com/yyoshiaki/VIRTUS2.git
Path: workflow/createindex.cwl Branch/Commit ID: master |
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A workflow that aligns a fasta file and provides statistics on the SAM file
A workflow that aligns a fasta file and provides statistics on the SAM file |
https://github.com/dockstore/bcc2020-training.git
Path: cwl-training/exercise3/solution/align_and_metrics_imports.cwl Branch/Commit ID: master |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: master |
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count-lines8-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines8-wf-noET.cwl Branch/Commit ID: main |
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qiime2 Deblur detect/correct sequence data
Option 2: Deblur from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/bespin-workflows/16s-qiime2.git
Path: subworkflows/qiime2-03-deblur.cwl Branch/Commit ID: develop |
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collapsed_fastq_to_bam.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/marianas/collapsed_fastq_to_bam.cwl Branch/Commit ID: master |
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wf_get_peaks_scatter_se.cwl
The \"main\" workflow. Takes fastq files generated using the seCLIP protocol (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5991800/) and outputs candidate RBP binding regions (peaks). runs: wf_get_peaks_se.cwl through scatter across multiple samples. |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_scatter_se.cwl Branch/Commit ID: master |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 1.0.7 |
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bird_scatter_values.cwl
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https://github.com/ReddyLab/bird-workflow.git
Path: 03_bird_scatter_values/bird_scatter_values.cwl Branch/Commit ID: main |
