Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph apply_cal.cwl

https://github.com/peijin94/LOFAR-Sun-tools.git

Path: utils/IM/LINC/lincSun/workflow/apply_cal.cwl

Branch/Commit ID: master
workflow graph canine_mutation_burden_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_mutation_burden_module.cwl

Branch/Commit ID: master
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 71d9c83
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/rnaseq_star_fusion.cwl

Branch/Commit ID: low-vaf
workflow graph Replace legacy AML Trio Assay

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/aml_trio_cle.cwl

Branch/Commit ID: master
workflow graph gatk-4.0.0.0-library-cram-to-gvcfs.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/gatk-4.0.0.0-library-cram-to-gvcfs.cwl

Branch/Commit ID: master
workflow graph Gathered Downsample and HaplotypeCaller

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/gathered_downsample_and_recall.cwl

Branch/Commit ID: downsample_and_recall
workflow graph qiime2 explore sample taxonomic composition

Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step2-dada2.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-08-taxonomic-analysis.cwl
workflow graph 04-quantification-pe-unstranded.cwl

RNA-seq 04 quantification

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-pe-unstranded.cwl

Branch/Commit ID: master
workflow graph filter-pcr-artifacts.cwl

DNase-seq - map - Filter PCR Artifacts

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/map/filter-pcr-artifacts.cwl

Branch/Commit ID: v1.0