Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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host_process.cwl
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https://github.com/azzaea/tsts.git
Path: cwl/host_process.cwl Branch/Commit ID: master |
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BD Rhapsody™ WTA Analysis Pipeline
The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file. |
https://github.com/longbow0/cwl.git
Path: v1.8/rhapsody_wta_1.8.cwl Branch/Commit ID: master Packed ID: main |
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alignment_workflow_md5checker.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: aligner/topmed-cwl/workflow/alignment_workflow_md5checker.cwl Branch/Commit ID: develop |
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alignment_novoalign.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_novoalign.cwl Branch/Commit ID: master |
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kfdrc_sentieon_alignment_wf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/kfdrc_sentieon_alignment_wf.cwl Branch/Commit ID: master |
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md5sum-workflow.cwl
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https://github.com/dockstore-testing/md5sum-checker.git
Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: 1.0.0 |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 9c57dba |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 930a2cf |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 0fed1c9 |
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pair-workflow.cwl
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https://github.com/mskcc/argos-cwl.git
Path: workflows/pair-workflow.cwl Branch/Commit ID: master |
