Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: 1.1.3
	functional analysis prediction with InterProScan	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/functional_analysis.cwl Branch/Commit ID: c1f8b22
	count-lines11-null-step-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines11-null-step-wf.cwl Branch/Commit ID: main
	collate_unique_SSU_headers.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 0cf06f1
	fp_filter workflow	https://github.com/ChrisMaherLab/PACT.git Path: subworkflows/fp_filter.cwl Branch/Commit ID: master
	find_hotspots_in_normals.cwl Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups	https://github.com/andurill/ACCESS-Pipeline.git Path: workflows/subworkflows/find_hotspots_in_normals.cwl Branch/Commit ID: master
	kfdrc_bwamem_subwf.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: workflows/dev/ultra-opt/workflows/kfdrc_bwamem_subwf.cwl Branch/Commit ID: master
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: master
	varscan somatic workflow	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: low-vaf
	strelka workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: downsample_and_recall

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