Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Create Genomic Collection for Bacterial Pipeline, ASN.1 input

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source_asn.cwl

Branch/Commit ID: master
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 5dc7c5c
workflow graph wf_input_norm_and_entropy.cwl

This workflow normalizes clip aligned reads against a size-matched input sample. Then, an entropy score is calculated for each peak found.

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_input_norm_and_entropy.cwl

Branch/Commit ID: master
workflow graph main.cwl

SMC-RNA challenge fusion detection submission

https://github.com/smc-rna-challenge/zhanghj-8071387.git

Path: main.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/dprelipcean/reana-demo-cms-h4l.git

Path: workflow/workflow.cwl

Branch/Commit ID: fix_workflow
workflow graph wf_exec_paleocar.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/exec_paleocar/wf_exec_paleocar.cwl

Branch/Commit ID: master
workflow graph integrity.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/integrity.cwl

Branch/Commit ID: release
workflow graph 32.cwl

https://github.com/qingmo-nscc-gz/vaspcwl.git

Path: 1-2/1-3/2-1/3-1/3-2/32.cwl

Branch/Commit ID: master
workflow graph Unaligned to aligned BAM

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: unaligned_bam_to_bqsr/align.cwl

Branch/Commit ID: master
workflow graph A CGP workflow to generate checksum and interleaved fastq from a [Cr|B]am file

A workflow to generate checksums of [B|Cr]am files and interleaved FastQs derived from them. See the [workflow-seq-import](https://github.com/cancerit/workflow-seq-import) website for more information.

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_xam_to_interleaved_fq.cwl

Branch/Commit ID: 0.3.2