Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 1st-workflow-control.cwl

https://github.com/MgCoders/of-public.git

Path: 1st-workflow-control.cwl

Branch/Commit ID: master

workflow graph workflow to detect fusion events

A workflow to run cpgRna Infuse pipeline from a single input BAM file (can be aligned or unaligned) of RNA-seq reads using cgpRna container. See the [cgpRna](https://github.com/cancerit/cgpRna) website for more information.

https://github.com/cancerit/cgpRna.git

Path: cwls/infuse_pipeline.cwl

Branch/Commit ID: dev

workflow graph metaphlan

See the [Metaphlan](https://bitbucket.org/biobakery/metaphlan2) website for more information.

https://github.com/stevetsa/Metaphlan-SBCGC.git

Path: metaphlan_wfl.cwl

Branch/Commit ID: master

workflow graph GATK-workflow-v1.0.cwl

https://github.com/FarahZKhan/GATK-CaseStudy.git

Path: CWLv1/GATK-workflow-v1.0.cwl

Branch/Commit ID: master

workflow graph project-workflow

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/project-workflow.cwl

Branch/Commit ID: dev

workflow graph GSC Paired Jobs

Serial combination of KnowEnG tools

https://github.com/KnowEnG-Research/cwl-specification.git

Path: code/workflow.gsc.cwl

Branch/Commit ID: master

workflow graph PGAP Pipeline

https://github.com/slottad/pgap.git

Path: wf_pgap.cwl

Branch/Commit ID: master

workflow graph birds.cwl

https://github.com/eosc-lofar/presto-cwl.git

Path: birds.cwl

Branch/Commit ID: visualise

workflow graph md5sum-workflow.cwl

https://github.com/dockstore-testing/md5sum-checker.git

Path: md5sum/md5sum-workflow.cwl

Branch/Commit ID: master

workflow graph Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass3.cwl

Branch/Commit ID: master