Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
---|---|---|---|
|
1st-workflow-control.cwl
|
![]() Path: 1st-workflow-control.cwl Branch/Commit ID: master |
|
|
workflow to detect fusion events
A workflow to run cpgRna Infuse pipeline from a single input BAM file (can be aligned or unaligned) of RNA-seq reads using cgpRna container. See the [cgpRna](https://github.com/cancerit/cgpRna) website for more information. |
![]() Path: cwls/infuse_pipeline.cwl Branch/Commit ID: dev |
|
|
metaphlan
See the [Metaphlan](https://bitbucket.org/biobakery/metaphlan2) website for more information. |
![]() Path: metaphlan_wfl.cwl Branch/Commit ID: master |
|
|
GATK-workflow-v1.0.cwl
|
![]() Path: CWLv1/GATK-workflow-v1.0.cwl Branch/Commit ID: master |
|
|
project-workflow
|
![]() Path: setup/cwl/project-workflow.cwl Branch/Commit ID: dev |
|
|
GSC Paired Jobs
Serial combination of KnowEnG tools |
![]() Path: code/workflow.gsc.cwl Branch/Commit ID: master |
|
|
PGAP Pipeline
|
![]() Path: wf_pgap.cwl Branch/Commit ID: master |
|
|
birds.cwl
|
![]() Path: birds.cwl Branch/Commit ID: visualise |
|
|
md5sum-workflow.cwl
|
![]() Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: master |
|
|
Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
|
![]() Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: master |