Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph collate_unique_SSU_headers.cwl

https://github.com/mr-c/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: master

workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 135976d

workflow graph pcawg_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: pcawg_annotate_wf.cwl

Branch/Commit ID: develop

workflow graph 02-trim-se.cwl

ChIP-seq 02 trimming - reads: SE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: master

workflow graph SSU-from-tablehits.cwl

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: master

workflow graph 04-peakcall.cwl

ChIP-seq 04 quantification - samples: treatment.

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/04-peakcall.cwl

Branch/Commit ID: master

workflow graph Find reads with predicted coding sequences above 60 AA in length

https://github.com/mr-c/ebi-metagenomics-cwl.git

Path: workflows/orf_prediction.cwl

Branch/Commit ID: viz

workflow graph crosscal.cwl

https://github.com/ska-sa/den.git

Path: cwl/workflows/crosscal.cwl

Branch/Commit ID: kat7-test

workflow graph main-NA12878-platinum-chr20.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/main-NA12878-platinum-chr20.cwl

Branch/Commit ID: master

workflow graph wf_calculate_models2.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/calculate_models/wf_calculate_models2.cwl

Branch/Commit ID: master