Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph merge and annotate svs with population allele freq

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/merge_svs.cwl

Branch/Commit ID: No_filters_detect_variants

workflow graph bwameth_mulitlib_start_with_trimmed.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/bwameth/bwameth_mulitlib_start_with_trimmed.cwl

Branch/Commit ID: main

workflow graph pipeline.cwl

https://github.com/hubmapconsortium/create-vis-symlink-archive.git

Path: pipeline.cwl

Branch/Commit ID: 6e55233

workflow graph exome alignment with qc

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/alignment_exome.cwl

Branch/Commit ID: low-vaf

workflow graph wf_run_exemplary_wf.cwl

https://github.com/BAMresearch/NFDI4IngScientificWorkflowRequirements.git

Path: exemplary_workflow/cwl/wf_run_exemplary_wf.cwl

Branch/Commit ID: main

workflow graph methylCtools_multilib_start_with_trimmed.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/methylCtools/methylCtools_multilib_start_with_trimmed.cwl

Branch/Commit ID: main

workflow graph filtering.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/subworkflows/filtering.cwl

Branch/Commit ID: master

workflow graph workflow.cwl

https://github.com/Andreja28/cloud-workflows.git

Path: cwl/torso/workflow.cwl

Branch/Commit ID: master

workflow graph oxog_varbam_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: 1.0.0

workflow graph rnaseq_pipeline_fastq.cwl

https://github.com/FarahZKhan/cwl_workflows.git

Path: topmed-workflows/TOPMed_RNAseq_pipeline/rnaseq_pipeline_fastq.cwl

Branch/Commit ID: master