Workflow: final-workflow.cwl

Fetched 2023-01-04 10:09:33 GMT
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Inputs

ID Type Title Doc
PATH String[]
tree String[]
accession String
host_stage String[]
organization String
managePy_Path String
url_cds_fasta String[]
deepPATH_bigwig String[]
scientific_name String[]
url_genomic_gff String[]
url_md5checksums String[]
deepPATH_analyses String[]
url_genomic_fasta String[]
url_protein_fasta String[]
blastdb_Path_stage String[]
gff_release_number Integer
hmmerdb_Path_stage String[]
link_to_publication String
login_apollo2_stage String[]
url_transcript_fasta String[]
deepPATH_apollo2_data String[]
deepPATH_genomic_fasta String[]

Steps

ID Runs Label Doc
dispatch
download
md5checksums
create_assembly_readme
apollo2_create_organism
createOrganism.cwl (CommandLineTool)
apollo2_data_processing
create_genePrediction_readme

Outputs

There are no outputs in this workflow

Permalink: https://w3id.org/cwl/view/git/3aabbb0f6635bb9354ad52f616ab7cfc61848eb6/final-workflow.cwl