Workflow: bulk_process.cwl
Fetched 2026-05-15 22:56:20 GMT
Verified with cwltool version 3.1.20230201224320
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This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| threads | Integer (Optional) | ||
| merged_bam | File | ||
| alignment_index | Directory (Optional) | ||
| encode_blacklist | File (Optional) |
Steps
There are no steps in this workflow
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| bam_file | File | ||
| alignment_qc_report | File |
Permalink:
https://w3id.org/cwl/view/git/44dbe381f68878ab607b167b62267c4ea97f3322/steps/bulk_process.cwl
