Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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02-trim-pe.cwl
ATAC-seq 02 trimming - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: v1.0 |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: ca6ca613 |
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ATAC-Seq peak caller workflow for single-end samples
This workflow execute peak caller a ATAC-Seq with pseudo samples |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak_caller_with_pseudo_replicates-control.cwl Branch/Commit ID: master |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: master |
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rRNA_selection.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: master |
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qiime2 demux paired sequences
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https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-02-demux-emp-paired.cwl |
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Tumor-Only Detect Variants workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: downsample_and_recall |
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word-mapping-dir.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/word-mapping-dir.cwl Branch/Commit ID: master Packed ID: main |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: master |
