Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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ensembl_genomes_to_variation_graph_with_uniprot_annotation_rdf.cwl
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https://github.com/vgteam/Veguns.git
Path: ensemblBacteriaUniProtVgExample/ensembl_genomes_to_variation_graph_with_uniprot_annotation_rdf.cwl Branch/Commit ID: master |
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cram_to_bam workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: low-vaf |
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running cellranger mkfastq and count
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: low-vaf |
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Unaligned to aligned BAM
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: low-vaf |
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Detect Variants workflow for WGS pipeline
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: low-vaf |
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lhcbreconstruct.cwl
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https://github.com/aldbr/dirac-cwl-proto.git
Path: test/workflows/lhcb/lhcbreconstruct.cwl Branch/Commit ID: main |
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LHCb MC workflow
This workflow is composed of 2 main steps that should generate 2 types of jobs: * MCSimulation (CommandLineTool): Gauss execution * MCReconstruction (Workflow): Boole, Moore, Brunel and DaVinci executions based on Gauss outputs |
https://github.com/aldbr/dirac-cwl-proto.git
Path: test/workflows/lhcb/description.cwl Branch/Commit ID: main |
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dna.cwl#main
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https://github.com/YangYang-Lcos/legacy.git
Path: workflows/make-to-cwl/dna.cwl Branch/Commit ID: master Packed ID: main |
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Water bodies detection based on NDWI and otsu threshold
Water bodies detection based on NDWI and otsu threshold |
https://github.com/Terradue/ogc-eo-application-package-hands-on.git
Path: water-bodies/app-package.cwl Branch/Commit ID: master Packed ID: water_bodies |
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gvcf-distr.cwl
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https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/gvcf-distr.cwl Branch/Commit ID: master |
