Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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checkm_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_checkm_wnode.cwl Branch/Commit ID: test |
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05-quantification-with-control.cwl
ChIP-seq - Quantification - samples: treatment and control |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl Branch/Commit ID: master |
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schemadef-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/schemadef-wf.cwl Branch/Commit ID: main |
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04-peakcall-pe.cwl
ATAC-seq 04 quantification - PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/04-peakcall-pe.cwl Branch/Commit ID: v1.0 |
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bird_workflow.cwl
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https://github.com/ReddyLab/bird-workflow.git
Path: bird_workflow.cwl Branch/Commit ID: main |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: downsample_and_recall |
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dynresreq-workflow-tooldefault.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow-tooldefault.cwl Branch/Commit ID: master |
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Hello World
Outputs a message using echo |
https://github.com/YangYang-Lcos/legacy.git
Path: workflows/hello/hello-param.cwl Branch/Commit ID: master |
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workflow.cwl
Implementing bamqc over and over again to get an idea of how easy or hard it is for a beginner to implement a basic workflow in different workflow systems. |
https://github.com/garyluu/one-workflow-many-ways.git
Path: cwl/workflow.cwl Branch/Commit ID: master |
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dedup-3-pass.cwl
run 3-pass dedup: algo LocusCollector + algo Dedup output_dup_read_name + algo Dedup dedup_by_read_name sequentially |
https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/dedup-3-pass.cwl Branch/Commit ID: master |
