Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph genomics-workspace-cds.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl

Branch/Commit ID: master
workflow graph checker-workflow-wrapping-workflow.cwl

This demonstrates how to wrap a \"real\" tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/dockstore-testing/md5sum-checker.git

Path: checker-workflow-wrapping-workflow.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: f914942
workflow graph rRNA_selection.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: master
workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: test
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 9c57dba
workflow graph wf_run_use_case.cwl

https://github.com/BAMresearch/NFDI4IngScientificWorkflowRequirements.git

Path: simple_use_case/cwl/wf_run_use_case.cwl

Branch/Commit ID: feature/simplify-cwl
workflow graph rna-seq-pipeline-per-sample_PE.cwl

https://github.com/yamaken37/jga-analysis.git

Path: rna-seq/Workflows/rna-seq-pipeline-per-sample_PE.cwl

Branch/Commit ID: rna-seq
workflow graph fail-unconnected.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/fail-unconnected.cwl

Branch/Commit ID: master
workflow graph step2: trimming fastq files (paired-end)

multiple fastq files trimming process using fastp version 0.23.4 and scatter feature requirement

 https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git

Path: workflow/01_trimming_fastq_subworkflow_pe.cwl

Branch/Commit ID: main