Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	CODEX analysis pipeline using Cytokit	https://github.com/hubmapconsortium/codex-pipeline.git Path: pipeline.cwl Branch/Commit ID: d8efe116c9fd79d21646ec215799b52b95dfd709
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 2353ee2550529ca5b0705c94b32022a21713db18
	CNV_pipeline	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_workflow/abstract_workflow.cwl Branch/Commit ID: 27011e882ea07bfcac23faec299341ec6215312b
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f
	AltAnalyze CellHarmony AltAnalyze CellHarmony ======================	https://github.com/datirium/workflows.git Path: workflows/altanalyze-cellharmony.cwl Branch/Commit ID: e45ab1b9ac5c9b99fdf7b3b1be396dc42c2c9620
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31
	bams2cram.cwl	https://github.com/biosciencedbc/jga-analysis.git Path: per-sample/Workflows/bams2cram.cwl Branch/Commit ID: 4003a84bda03479f268962bd1e955b7509e4b500
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl Branch/Commit ID: f248ac3ccbf6840af721251c7e9451abd9b2c09f