Workflow: hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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- |
- Default Values
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- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/609aead9804a8f31fa9b3dbc7e52105aec487f31/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
ID | Type | Title | Doc |
---|---|---|---|
lds2 | File | ||
workdir | Directory | ||
hmm_path | Directory | ||
hmms_tab | File (Optional) | ||
proteins | File | ||
asn_cache | Directory | ||
input_jobs | File |
Steps
ID | Runs | Label | Doc |
---|---|---|---|
gpx_qdump |
../progs/gpx_qdump.cwl
(CommandLineTool)
|
gpx_qdump | |
hmmsearch_wnode |
../progs/hmmsearch_wnode.cwl
(CommandLineTool)
|
hmmsearch_wnode |
Outputs
ID | Type | Label | Doc |
---|---|---|---|
output | File |
Permalink:
https://w3id.org/cwl/view/git/609aead9804a8f31fa9b3dbc7e52105aec487f31/task_types/tt_hmmsearch_wnode_plus_qdump.cwl