Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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hisat2-stringtie_wf_pe.cwl
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https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: master |
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bams2gvcf.woBQSR_male_chrXY_wXTR.multisamples.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR_male_chrXY_wXTR.multisamples.cwl Branch/Commit ID: master |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: 0cd2d70 |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 3f85843 |
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Align reference proteins plane complete workflow, with miniprot
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment_miniprot.cwl Branch/Commit ID: master |
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gather AML trio outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle_gathered.cwl Branch/Commit ID: master |
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mutect parallel workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: downsample_and_recall |
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g_vc.cwl
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https://github.com/sylviaJian/test_pipelines.git
Path: g_vc.cwl Branch/Commit ID: main |
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step5: The process of updating the GFF format file from identifying TSS (transcription start sites) from CAGE-seq data
\" The process of updating the GFF format file from identifying TSS - transcription start sites - from paired-end CAGE-seq data. This workflow consists of the following files: (1) Tools/06_combined_exec_TSSr.cwl, (2) Tools/07_join_all_assignedClusters.cwl, (3) Tools/08_uniq_tss_feature.cwl, (4) Tools/09_update_gtf.cwl \" |
https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git
Path: workflow/04_tssr_subworkflow_pe.cwl Branch/Commit ID: main |
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Workflow that executes the SBG L1 Workflow
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https://github.com/unity-sds/sbg-workflows.git
Path: L1-to-L2-e2e.cwl Branch/Commit ID: 1.1.1 |
