Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 1st-workflow.cwl

https://github.com/cnherrera/testCWL.git

Path: 1st-workflow.cwl

Branch/Commit ID: main
workflow graph CRAM_md5sum_checker_wrapper.cwl

This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/DataBiosphere/toolbox.git

Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl

Branch/Commit ID: 1.30.0
workflow graph io-any-wf-1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-any-wf-1.cwl

Branch/Commit ID: master
workflow graph qa_check_subwf.cwl

This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs

https://github.com/svonworl/oxog-dockstore-tools.git

Path: qa_check_subwf.cwl

Branch/Commit ID: master
workflow graph rna_seq_workflow_2.cwl

https://github.com/alexiswl/novice-tutorial-exercises.git

Path: rna_seq_workflow_2.cwl

Branch/Commit ID: main
workflow graph kmer_cache_retrieve

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_retrieve.cwl

Branch/Commit ID: test
workflow graph abra_workflow.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/ABRA/abra_workflow.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_md5checksums/workflow.cwl

Branch/Commit ID: master
workflow graph bulk scRNA-seq pipeline using Salmon

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: bulk-pipeline.cwl

Branch/Commit ID: 1af8809
workflow graph exome alignment and germline variant detection

https://github.com/litd/analysis-workflows.git

Path: definitions/subworkflows/germline_detect_variants.cwl

Branch/Commit ID: master