Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph standard_bam_to_collapsed_qc.cwl

This is a workflow to go from standard bams to collapsed bams and QC results.

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/standard_bam_to_collapsed_qc.cwl

Branch/Commit ID: master
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf1.cwl

Branch/Commit ID: master
workflow graph echo-wc_inline.cwl

Counts words of a message via echo and wc

 https://github.com/NLeSC/scriptcwl.git

Path: tests/data/workflows/echo-wc_inline.cwl

Branch/Commit ID: master
workflow graph delay-calibration.cwl

https://github.com/lonbar/VLBI-cwl.git

Path: workflows/delay-calibration.cwl

Branch/Commit ID: master
workflow graph change_formats_and_names.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/assembly/change_formats_and_names.cwl

Branch/Commit ID: eosc-life-gos
workflow graph workflow.cwl

https://github.com/screx/cwl-tutorial.git

Path: bioinformatics/tools/workflow.cwl

Branch/Commit ID: master
workflow graph functional analysis prediction with InterProScan

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: f993cad
workflow graph search.cwl#main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/search.cwl

Branch/Commit ID: main

Packed ID: main
workflow graph two-step-workflow.cwl

https://github.com/BiodataAnalysisGroup/intro-to-cwl-docker.git

Path: _includes/cwl/two-step-workflow.cwl

Branch/Commit ID: gh-pages
workflow graph Single-cell Reference Indices

Single-cell Reference Indices Builds a Cell Ranger and Cell Ranger ARC compatible reference folders from the custom genome FASTA and gene GTF annotation files

 https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-ref-indices-wf.cwl

Branch/Commit ID: main