Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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dynresreq-workflow-tooldefault.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/dynresreq-workflow-tooldefault.cwl Branch/Commit ID: main |
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raw-reads-1.cwl
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https://github.com/EBI-Metagenomics/pipeline-v5.git
Path: workflows/conditionals/raw-reads/raw-reads-1.cwl Branch/Commit ID: master |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/icgc-tcga-pancancer/pcawg-snv-indel-annotation.git
Path: preprocess_vcf.cwl Branch/Commit ID: master |
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Sounder SIPS L1A PGE
Processes Sounder SIPS L0 products into L1A products |
https://github.com/unity-sds/unity-sps-workflows.git
Path: sounder_sips/l1a_package.cwl Branch/Commit ID: main Packed ID: main |
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cnv_codex
CNV CODEX calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_codex.cwl Branch/Commit ID: 1.0.9 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: cc7fb3e5c534036638921878527a610fd5e1c2ab |
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tindaisy-postmerge.cwl
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https://github.com/ding-lab/TinDaisy.git
Path: cwl/workflows/tindaisy-postmerge.cwl Branch/Commit ID: 67e474fbec6f36a14f15530f8b6c8d16f6abba0b |
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gp_makeblastdb
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86 |
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ValidateSinglePhotoElectronResponse
Validate single photon electron response. |
https://github.com/gammasim/workflows.git
Path: workflows/ValidateSinglePhotoElectronResponse.cwl Branch/Commit ID: main |
