Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph step-valuefrom3-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom3-wf_v1_2.cwl

Branch/Commit ID: 6a46105708870aa3cf97c8ba91884272b2857975
workflow graph kfdrc_process_se_set.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: subworkflows/kfdrc_process_se_set.cwl

Branch/Commit ID: 3fba930f3eca7880320fa19744e377a9d5dca9d5
workflow graph stat222.cwl

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: boa/stat222.cwl

Branch/Commit ID: master
workflow graph spatial transcriptomics pipeline including analysis with scanpy and squidpy

https://github.com/hubmapconsortium/xenium-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: 3b219c6
workflow graph module-1

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.cwl

Branch/Commit ID: 2.4.x
workflow graph ACTseq.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflows/ACTseq.cwl

Branch/Commit ID: master
workflow graph samtools_mpileup_subpipeline.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/samtools_mpileup_subpipeline.cwl

Branch/Commit ID: master
workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph Exome QC workflow

https://github.com/markrobbo/workflows.git

Path: workflows/hello/exome_alignment_packed.cwl

Branch/Commit ID: master

Packed ID: workflow_exome.cwl
workflow graph kfdrc_RNAseq_workflow.cwl

https://github.com/kids-first/kf-rnaseq-workflow.git

Path: workflow/kfdrc_RNAseq_workflow.cwl

Branch/Commit ID: master