Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	PGAP Pipeline	https://github.com/ncbi-gpipe/pgap.git Path: progs/unit_tests/test_final_bact_asn/test.cwl Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: aaafb033b3b96843142c8a481a135bfb9d0b28e9
	Run tRNAScan	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 269d656eb8eaa5fc29a5f74cb0aa5756868b46b7
	Run tRNAScan	https://github.com/ncbi-gpipe/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: c18fbba1308aed7406b94e9ddac02584407d9319
	functional analysis prediction with InterProScan	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/functional_analysis.cwl Branch/Commit ID: 85155424fa5654526517369be2fa479a7d4d90de
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 70e530b65b33301032b7510095d89e497bf5e34e
	GSC Paired Jobs Serial combination of KnowEnG tools	https://github.com/KnowEnG-Research/cwl-specification.git Path: code/workflow.gsc.cwl Branch/Commit ID: 8ca52a8d2b76d91b7618032a22699c5be7d12c6c
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b
	zip_and_index_vcf.cwl This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.	https://github.com/baminou/OxoG-Dockstore-Tools.git Path: zip_and_index_vcf.cwl Branch/Commit ID: 3bd1b85615fcae5092ccacce2eac395b9a6f1950