Workflow: zip_and_index_vcf.cwl
Fetched 2023-01-11 22:34:46 GMT
Verified with cwltool version 3.1.20221201130942
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| vcf | File |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| zip_step |
zip_and_index_vcf.cwl#zip_step/cb165ca3-4da7-4dff-99e5-db57706f6fe7
(CommandLineTool)
|
||
| index_step |
zip_and_index_vcf.cwl#index_step/c47eab1c-e398-4fa6-8027-8cc27cf174cf
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| zipped_file | File | ||
| indexed_file | File |
Permalink:
https://w3id.org/cwl/view/git/3bd1b85615fcae5092ccacce2eac395b9a6f1950/zip_and_index_vcf.cwl
