Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: 3f85843 |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: d3b8e45 |
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chksum_for_a_corrupted_fastq_file.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_a_corrupted_fastq_file.cwl Branch/Commit ID: develop |
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metrics-flow.cwl
Run metrics workflow |
https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/metrics-flow.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: c211071 |
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uncollapsed_bam_generation.cwl
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https://github.com/msk-access/uncollapsed_bam_generation.git
Path: uncollapsed_bam_generation.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: master |
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bulk scRNA-seq pipeline using Salmon
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: bulk-pipeline.cwl Branch/Commit ID: c502823 |
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AcceptParameterFailure
validation or review of parameter updates failed. Action required and feedback to be provided. |
https://github.com/gammasim/workflows.git
Path: workflows/AcceptParameterFailure.cwl Branch/Commit ID: main |
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qiime2 create phylogenetic tree
Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-05-phylogeny.cwl |
