Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines7-wf_v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/count-lines7-wf_v1_0.cwl Branch/Commit ID: 0fe3ca65d19ed76b7c5095cf2d915658d26b87fb |
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count-lines16-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines16-wf.cwl Branch/Commit ID: main |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: d4e5e53 |
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stage_data_workflow.vcf_to_aliquot_maf.cwl
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https://github.com/NCI-GDC/aliquot-maf-cwl.git
Path: vcf-to-aliquot-maf/subworkflows/stage_data_workflow.vcf_to_aliquot_maf.cwl Branch/Commit ID: main |
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super-enhancer.cwl
Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl) |
https://github.com/Barski-lab/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: 8587882f145d3eb8e258e7bf819a94f8dd666dbf |
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maf2vcf_gz_workflow.cwl
Workflow to convert a maf file into a vcf.gz with .tbi index |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/maf2vcf_gz_workflow.cwl Branch/Commit ID: ab0192b19d01046d5db2fc5233678a97b47210e6 |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: test |
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Align reference proteins plane complete workflow, with miniprot
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment_miniprot.cwl Branch/Commit ID: dev |
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fastq_foreign_chromosome_cleanup
This workflow remove foreign chromosome comtamination from blastn TSV files |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/fastq-foreign-chromosome-cleanup.cwl Branch/Commit ID: master |
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workflow.cwl
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https://github.com/Andreja28/cloud-workflows.git
Path: cwl/bone-min-org-app/workflow.cwl Branch/Commit ID: master |
