Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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encode_mapping_workflow.cwl
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https://github.com/ENCODE-DCC/pipeline-container.git
Path: local-workflows/encode_mapping_workflow.cwl Branch/Commit ID: v1.0 |
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helloworld.cwl
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https://github.com/audrium/reana-demo-scattered-helloworld.git
Path: workflow/cwl/helloworld.cwl Branch/Commit ID: master |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 44dbe38 |
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grep-and-count.cwl
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https://github.com/markrobbo/workflows.git
Path: workflows/presentation-demo/grep-and-count.cwl Branch/Commit ID: master |
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EMG pipeline v3.0 (single end version)
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: caea457 |
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HS Metrics workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: downsample_and_recall |
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04-quantification-pe-stranded.cwl
RNA-seq 04 quantification |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-pe-stranded.cwl Branch/Commit ID: master |
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output-arrays-int-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/output-arrays-int-wf.cwl Branch/Commit ID: master |
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qc_workflow_wo_waltz.cwl
This workflow is intended to be used to test the QC module, without having to run the long waltz step |
https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/QC/qc_workflow_wo_waltz.cwl Branch/Commit ID: master |
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qiime2 importing data
Obtaining and importing data from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-01-import-data-paired.cwl |
