Workflow: rhapsody_targeted_1.9-beta.cwl#VDJ_Annotate_Reads.cwl
Fetched 2024-05-19 13:03:04 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| vdjType | |||
| vdjVersion | |||
| Cdr3QueryFasta | File (Optional) |
.fasta.gz |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| CallCdr3 |
rhapsody_targeted_1.9-beta.cwl#VDJ_Annotate_Reads.cwl/CallCdr3/CallCdr3Inner
(CommandLineTool)
|
||
| PrunePyIR |
rhapsody_targeted_1.9-beta.cwl#VDJ_Annotate_Reads.cwl/PrunePyIR/PrunePyIRInner
(CommandLineTool)
|
||
| CallConstantRegion |
rhapsody_targeted_1.9-beta.cwl#VDJ_Annotate_Reads.cwl/CallConstantRegion/CallConstantRegionInner
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| Cdr3Call | File (Optional) |
Permalink:
https://w3id.org/cwl/view/git/b9ec66d82bc04934fbe9f9088ae7e802d72c4a4e/v1.9-beta/rhapsody_targeted_1.9-beta.cwl?part=VDJ_Annotate_Reads.cwl
