Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph split-bams-by-strand-and-index.cwl

Split reads in a BAM file by strands and index forward and reverse output BAM files

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/quant/split-bams-by-strand-and-index.cwl

Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
workflow graph star_samtools_featurecounts_edger.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_featurecounts_edger.cwl

Branch/Commit ID: ff0e5dfe44fb85900b5563ab340de8ad3d952eb5
workflow graph rna annotation

RNAs - predict, cluster, identify, annotate

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/rna-annotation.workflow.cwl

Branch/Commit ID: d9cf22cd615542c94f7974e8bce4cf29b24d985f
workflow graph count-lines9-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl

Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda
workflow graph Resolve duplicate/overlapping calls in the gVCFs in a named list

https://github.com/curoverse/l7g.git

Path: cwl-version/clean/cwl/tiling_clean_gvcf_named.cwl

Branch/Commit ID: e4076d3ef7deda1bcc57bfe5e3d1dc7bf58238ff
workflow graph rna amplicon analysis for fastq files

RNAs - qc, preprocess, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/amplicon-fastq.workflow.cwl

Branch/Commit ID: d9cf22cd615542c94f7974e8bce4cf29b24d985f
workflow graph kallisto_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/paired_end/kallisto_wf_pe.cwl

Branch/Commit ID: e2528f4d7e4ba5664fc171f9a25fc1490ae27c91
workflow graph scatter-valuefrom-wf2.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl

Branch/Commit ID: 7bfd77118cdc80dd7150115dd7a1a7ee6046f6fe
workflow graph js_output_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/js_output_workflow.cwl

Branch/Commit ID: 3ed10d0ea7ac57550433a89a92bdbe756bdb0e40
workflow graph workflow1.cwl

https://github.com/petehague/Stoa.git

Path: actions/workflow1.cwl

Branch/Commit ID: 1bd30c533e4a66da5cbfe531bdac28fcb310f253