Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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main_get_dataset.cwl
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https://github.com/alpha-unito/cwl-montage-workflow.git
Path: cwl/main_get_dataset.cwl Branch/Commit ID: main |
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PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: test |
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bulk_analysis.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_analysis.cwl Branch/Commit ID: d0e845d |
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validate_interleaved_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/validate_interleaved_fq.cwl Branch/Commit ID: 0.4.1 |
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dna.cwl#main
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https://github.com/common-workflow-language/workflows.git
Path: workflows/make-to-cwl/dna.cwl Branch/Commit ID: master Packed ID: main |
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EMG pipeline v4.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-single.cwl Branch/Commit ID: master |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fastq.workflow.cwl Branch/Commit ID: master |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: downsample_and_recall |
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biscuit_align_dedup_sort_merge.cwl
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https://github.com/CompEpigen/PipelineOlympics.git
Path: CWL/workflows/Biscuit/tools/biscuit_align_dedup_sort_merge.cwl Branch/Commit ID: 3292bcf6fbb81a638885fb839a6ebecf06abbbed |
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Whole genome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: master |
