Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Bacterial Annotation, ab initio (first pass) searched against AntiFam

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_ab_initio_antifam.cwl

Branch/Commit ID: dev
workflow graph preference-workflow.cwl

https://github.com/johnbradley/iMADS-worker.git

Path: predict_service/preference-workflow.cwl

Branch/Commit ID: master
workflow graph macs2.cwl

string

 https://github.com/pitagora-network/DAT2-cwl.git

Path: workflow/epigenome-chip-seq/macs2/macs2.cwl

Branch/Commit ID: main
workflow graph qiime2 diversity analyses

Alpha and beta diversity analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step3-alpha-analysis.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: qiime2-06-alpha-beta-diversity.cwl
workflow graph bgzip and index VCF

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: low-vaf
workflow graph clustering.cwl

https://github.com/epigenomics-screw/screw.git

Path: cwl/clustering.cwl

Branch/Commit ID: master
workflow graph qc.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/conditionals/qc.cwl

Branch/Commit ID: eosc-life-gos
workflow graph vcf_to_aliquot_maf_wf.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/vcf_to_aliquot_maf_wf.cwl

Branch/Commit ID: main
workflow graph bwameth_trim_align_merge_sort_dedup.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/bwameth/tools/bwameth_trim_align_merge_sort_dedup.cwl

Branch/Commit ID: main
workflow graph Simulation Production

Top-level workflow for the production and processing of a new simulated dataset.

 https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git

Path: workflows/uc-dpps-XXXX.cwl

Branch/Commit ID: main