Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: 0e98de8f692bb7b9626ed44af835051750ac20cd |
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SAMSA2 pipeline
SAMSA2 complete workflow for meta-omics read annotation Steps: - Diamond read blastx - Refseq - SEED - SAMSA2 processing |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_samsa2.cwl Branch/Commit ID: master |
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wf-alignment.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-alignment.cwl Branch/Commit ID: master |
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lobSTR-workflow.cwl
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https://github.com/common-workflow-language/workflows.git
Path: workflows/lobSTR/lobSTR-workflow.cwl Branch/Commit ID: 17b65ea19d81527090fded62ffa0e1ba3b25d56 |
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workflow_input_format_expr_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/workflow_input_format_expr_v1_2.cwl Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 4ae14dd3a447c90022e3dfeb53fc05b8436e2775 |
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hipepipe.cwl
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https://github.com/vuillaut/cookbooks.git
Path: CWL-pipeline/hipepipe.cwl Branch/Commit ID: master |
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checkm_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_checkm_wnode.cwl Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc |
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qiime2 identify differentially abundant features
Differential abundance testing with ANCOM from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-09-ancom.cwl |
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merge_filter.cwl
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https://github.com/CompEpigen/ChIPseq_workflows.git
Path: CWL/workflow_modules/merge_filter.cwl Branch/Commit ID: master |
