Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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samtools_sort
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_sort.cwl Branch/Commit ID: master |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 9c57dba |
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io-any-wf-1.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/io-any-wf-1.cwl Branch/Commit ID: master |
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cram_to_bam workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: low-vaf |
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assembly.cwl
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https://github.com/vetscience/Assemblosis.git
Path: Run/assembly.cwl Branch/Commit ID: master |
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merge_duprem_filter.cwl
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https://github.com/CompEpigen/ChIPseq_workflows.git
Path: CWL/workflow_modules/merge_duprem_filter.cwl Branch/Commit ID: master |
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Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl
Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence. |
https://github.com/leipzig/2020-covid-19-bh.git
Path: Ambarish_Kumar_SOP/CWL/Ambarish_Kumar_SOP-GATK-SAR-CoV-2.cwl Branch/Commit ID: main |
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checkm_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_checkm_wnode.cwl Branch/Commit ID: master |
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kb-tss-preprocess-all.cwl#align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/kb-tss-preprocess-all.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 3b602cb |
