Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph topmed-alignment.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment.cwl

Branch/Commit ID: 1.32.0
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines4-wf.cwl

Branch/Commit ID: main
workflow graph GATK-Sub-Workflow-h3abionet-indel.cwl

https://github.com/h3abionet/h3agatk.git

Path: workflows/GATK/GATK-Sub-Workflow-h3abionet-indel.cwl

Branch/Commit ID: 1.0.1
workflow graph Protein Ligand Complex MD Setup tutorial using BioExcel Building Blocks (biobb)

Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI).

https://github.com/bioexcel/biobb-wf-md-setup-protein-cwl.git

Path: protein_md.cwl

Branch/Commit ID: master
workflow graph record-in-secondaryFiles-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/record-in-secondaryFiles-wf.cwl

Branch/Commit ID: master
workflow graph cram_to_bam workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/revsort.cwl

Branch/Commit ID: master
workflow graph main-wes_chr21_test.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/main-wes_chr21_test.cwl

Branch/Commit ID: master
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: lobstr-v1
workflow graph snpeff_all.cwl

https://github.com/nigyta/rice_reseq.git

Path: workflows/snpeff_all.cwl

Branch/Commit ID: master